Resources
Database Restricted Federated
Microbiological, Immunological and Biochemical Characteristics of the Development of Ventilator Associated Pneumonia
The respiratory microbiome plays a critical role in metabolism, immune system maturation, and protection against pathogens. Traditionally, respiratory microbiology in pneumonia focused on identifying a specific pathogen, often disregarding normal or…
Published: Dec. 5, 2025. Version: 1.1.1 | DOI: 10.13026/rtc6-cq72
Database Credentialed Federated
Antibiotic Resistance Microbiology Dataset Mass General Brigham (ARMD-MGB)
The Antibiotic Resistance Microbiology Dataset – MGB (ARMD-MGB) is a de-identified resource derived from electronic health records (EHR) that facilitates research in antimicrobial resistance (AMR). ARMD-MGB encompasses data collected from over…
antimicrobial resistance electronic health records medical informatics
Published: Dec. 5, 2025. Version: 1.0.0 | DOI: 10.13026/2r5k-b955
Database Credentialed Federated
EchoGraph-annotated ECHO-NOTE2NUM examples
This repository releases the EchoGraph-annotated ECHO-NOTE2NUM dataset, containing 45,794 echocardiography reports with comprehensive entity and relation annotations. Each report from the ECHO-NOTE2NUM dataset has been automatically annotated using …
Published: Dec. 4, 2025. Version: 1.0.0 | DOI: 10.13026/hb5q-9532
Database Contributor Review Federated
InReDD-Dataset-PAN924
InReDD-Dataset-PAN924 is a collection of 924 radiographic images annotated with mouth and teeth labels by specialists from the InReDD research group.
InReDD (Interdisciplinary Research Group in Digital Dentistry) is a collaborative research initiati…
Published: Nov. 23, 2025. Version: 1.0.0 | DOI: 10.13026/r5nt-we67
Database Credentialed Federated
MedVAL-Bench: Expert-Annotated Medical Text Validation Benchmark
MedVAL-Bench is a dataset containing physician evaluations of errors in language model (LM)-generated medical text. The dataset spans 6 diverse medical text generation tasks and includes annotations from 12 physicians on clinically significant error…
Published: Nov. 14, 2025. Version: 1.0.1 | DOI: 10.13026/653w-3038
Database Credentialed Federated
Predictors of Hospital Onset Infection: A Matched Retrospective Cohort Dataset
This repository contains a de-identified and curated patient-level dataset for modeling the impact of fine-grained environmental and patient-level factors on nosocomial acquisition of a wide range of drug-susceptible and drug-resistant pathogens. Th…
infection control clinical machine learning infectious diseases electronic health records hospital onset infection colonization pressure
Published: Nov. 4, 2025. Version: 1.0.0 | DOI: 10.13026/k70x-0m81
Database Credentialed Federated
MedVAL-Bench: Expert-Annotated Medical Text Validation Benchmark
MedVAL-Bench is a dataset containing physician evaluations of errors in language model (LM)-generated medical text. The dataset spans 6 diverse medical text generation tasks and includes annotations from 12 physicians on clinically significant error…
Published: Nov. 4, 2025. Version: 1.0.0 | DOI: 10.13026/8ga5-6661
Database Open Federated
HeartCycle: A comprehensive dataset of synchronized impedance cardiography and echocardiography for accurate hemodynamic predictions
The "HeartCycle" dataset offers a comprehensive collection of synchronized impedance cardiography (ICG) and echocardiography (ECHO) signals, supplemented with finger photoplethysmography (PPG), heart sounds, and electrocardiography (ECG) data from 1…
cardiovascular physiology electrophysiological study echocardiography machine learning impedance cardiography
Published: Nov. 3, 2025. Version: 1.0.0 | DOI: 10.13026/z865-eb23
Database Contributor Review Federated
ER-REASON: A Benchmark Dataset for LLM-Based Clinical Reasoning in the Emergency Room
The ER-Reason dataset is a benchmark designed to evaluate LLM-based clinical reasoning and decision-making in the emergency room (ER), a high-stakes setting where clinicians make rapid, consequential decisions across diverse patient presentations an…
Published: Oct. 23, 2025. Version: 1.0.0 | DOI: 10.13026/55s7-3c27
Database Credentialed Federated
CXReasonBench: A Benchmark for Evaluating Structured Diagnostic Reasoning in Chest X-rays
Recent progress in Large Vision-Language Models (LVLMs) has enabled promising applications in medical tasks such as report generation and visual question answering. However, existing benchmarks focus mainly on the final diagnostic answer, offering l…
structured chest x-ray qa intermediate reasoning steps evaluation structured reasoning chest x-ray benchmark grounded reasoning diagnostic reasoning structured diagnostic pipeline
Published: Oct. 23, 2025. Version: 1.0.1 | DOI: 10.13026/d14j-1b45