Resources


Software Open Federated

Gradient Algorithm

Source: Physionet

In finding an optimal stimulus waveform for inducing switches in neuronal states, analytical techniques from optimal control theory are often found to be difficult to use or extremely time intensive. Here, we present the code for a gradient-based al…

optimization

Published: Aug. 21, 2015. Version: 1.0.0


Software Open Federated

Multiscale Multifractal Analysis

Source: Physionet

Multiscale multifractal analysis (MMA) (Gierałtowski et al., 2012) is a time series analysis method, designed to describe scaling properties of fluctuations within the signal analyzed. The main result of this procedure is the so called Hurst surface…

entropy complexity

Published: Jan. 31, 2015. Version: 1.0.0


Software Open Federated

Dynamical Density Delay Maps

Source: Physionet

This project contains Matlab functions for visualizing the behavior of complex systems by means of the dynamical density delay mapping ("D3-Map") technique . This simple-to-implement visualization method provides an animated representatio…

visualization complexity

Published: Jan. 31, 2015. Version: 1.0.0


Software Open Federated

Random Search Toolbox

Source: Physionet

A major issue with many signal processing and machine learning algorithms is the lack of optimisation methods for determining the numerous hyper-parameters associated with the model as well as the knowledge of which hyper-parameters are relevant. Th…

Published: Nov. 4, 2014. Version: 1.0.0


Software Open Federated

FECGSYN Toolbox

Source: Physionet

The FECGSYN toolbox is a reference open-source platform for NI-FECG research, product of a collaboration between the Department of Engineering Science, University of Oxford (DES-OX), the Institute of Biomedical Engineering, TU Dresden (IBMT-TUD) and…

fetal ecg

Published: Nov. 4, 2014. Version: 1.0.0


Software Open Federated

edf-anonymize

Source: Physionet

edf-anonymize reads an EDF or EDF+ file (input), writing an anonymized copy of it as output.

anonymization deidentification phi

Published: May 17, 2010. Version: 1.0.0


Software Open Federated

WFDB SWIG Toolbox for MATLAB

Source: Physionet

The WFDB SWIG Toolbox for MATLAB is a collection of applications for reading, writing, manipulating, and plotting PhysioBank data, implemented as functions in MATLAB.

wfdb

Published: Aug. 17, 2009. Version: 1.0.0 | DOI: 10.13026/C28378


Software Open Federated

TWAnalyser - A T-wave Alternans Detector

Source: Physionet

This software suite consists of Matlab implementations of the widely used Spectral Method (SM) and Modified Moving Average (MMA) for T-wave alternans (TWA) detection. It was initially developed for the PhysioNet/CinC Challenge 2008, in which these a…

ecg

Published: Nov. 18, 2008. Version: 1.0.0


Software Open Federated

De-Identification Software Package

Source: Physionet

The deid software package includes code and dictionaries for automated location and removal of protected health information (PHI) in free text from medical records.

anonymization deidentification phi

Published: Dec. 18, 2007. Version: 1.1 | DOI: 10.13026/C20M3F


Software Open Federated

AFVP - A Realistic Ventricular Rhythm Model During AF

Source: Physionet

AFVP generates a synthesized beat-to-beat interval sequence of ventricular excitations with a realistic structure observed during AF.

interbeat simulation rr interval

Published: Aug. 9, 2007. Version: 1.0.0