Resources


Database Open Federated

MIMIC-IV-ED Demo

Source: Physionet

MIMIC-IV-ED is a publicly accessible database of over 400,000 emergency department (ED) admissions to the Beth Israel Deaconess Medical Center between 2011 and 2019. Access to MIMIC-IV-ED requires registration on PhysioNet, identity verification, co…

mimic emergency department

Published: Feb. 8, 2023. Version: 2.2 | DOI: 10.13026/jzz5-vs76


Database Open Federated

MIMIC-IV Clinical Database Demo

Source: Physionet

The Medical Information Mart for Intensive Care (MIMIC)-IV database is comprised of deidentified electronic health records for patients admitted to the Beth Israel Deaconess Medical Center. Access to MIMIC-IV is limited to credentiale…

mimic critical care electronic health record

Published: Jan. 31, 2023. Version: 2.2 | DOI: 10.13026/dp1f-ex47


Model Credentialed Federated

Clinical-T5: Large Language Models Built Using MIMIC Clinical Text

Source: Physionet

Recent advances in scaling large language models (LLMs) has resulted in significant improvements over a number of natural language processing benchmarks. There has been some work to pretrain these language models over clinical text. These works demo…

Published: Jan. 25, 2023. Version: 1.0.0 | DOI: 10.13026/rj8x-v335


Database Open Federated

Pressure, flow, and dynamic thoraco-abdominal circumferences data for adults breathing under CPAP therapy

Source: Physionet

A respiratory pressure, flow, and dynamic circumference (chest and abdominal) dataset was collected from 30 healthy adults at the University of Canterbury under Human Research Ethics Committee (HREC) ethics. Pressure and flow data was collected usin…

Published: Jan. 25, 2023. Version: 1.0.0 | DOI: 10.13026/25q9-y416


Software Open Federated

Waveform Database Software Package (WFDB) for Python

Source: Physionet

Physiological waveforms - such as electrocardiograms (ECG), electroencephalograms (EEG), electromyograms (EMG) - are generated during the course of routine care. These signals contain information that can be used to understand underlying conditions …

waveform wfdb python

Published: Jan. 25, 2023. Version: 4.1.0 | DOI: 10.13026/9njx-6322


Database Credentialed Federated

MIMICEL: MIMIC-IV Event Log for Emergency Department

Source: Physionet

In this work, we extract an event log from the MIMIC-IV-ED dataset by adopting a well-established event log generation methodology, and we name this event log MIMICEL. The data tables in the MIMIC-IV-ED dataset relate to each other based on the exis…

Published: Jan. 24, 2023. Version: 1.1.0 | DOI: 10.13026/9x27-dd33


Challenge Contributor Review Federated

BioNLP Workshop 2023 Shared Task 1A: Problem List Summarization

Source: Physionet

Automatically summarizing patients’ main problems from the daily care notes in the electronic health record can help mitigate information and cognitive overload for clinicians and provide augmented intelligence via computerized diagnostic deci…

bionlp electronic health record summarization clinical natural language processing

Published: Jan. 19, 2023. Version: 1.0.0 | DOI: 10.13026/1z6g-ex18


Database Credentialed Federated

Establishment of a Chinese critical care database from electronic healthcare records in a tertiary care medical center

Source: Physionet

The medical specialty of critical care, or intensive care, provides emergency medical care to patients suffering from life-threatening complications and injuries. The medical specialty is featured by the generation of a huge amount of high-granulari…

critical care database china

Published: Jan. 19, 2023. Version: 1.0 | DOI: 10.13026/901c-yv54


Database Open Federated

Simultaneous physiological measurements with five devices at different cognitive and physical loads

Source: Physionet

This open database contains physiological measurements from 13 adult and healthy subjects during a standardized experimental setup. The physiology was examined with five different devices (NeXus-10 MKII, eMotion Faros 360°, SOMNOtouch NIBP,…

movement heart rate ecg photoplethysmogram temperature holter accelerometer noise multiparameter hrv respiration

Published: Jan. 18, 2023. Version: 1.0.2 | DOI: 10.13026/wce5-fj54


Database Credentialed Federated

MIMIC-IV-ED

Source: Physionet

MIMIC-IV-ED is a large, freely available database of emergency department (ED) admissions at the Beth Israel Deaconess Medical Center between 2011 and 2019. The database contains ~425,000 ED stays. Vital signs, triage information, medication reconci…

emergency department ed mimic mimic-iv electronic health record emergency

Published: Jan. 6, 2023. Version: 2.2 | DOI: 10.13026/5ntk-km72