Resources


Model Credentialed Federated

Medical AI Research Foundations: A repository of medical foundation models

Source: Physionet

Medical AI Research Foundations is a repository of open-source medical foundation models. With this collection of non-diagnostic models, APIs, and resources like code and data, researchers and developers can accelerate their medical AI research. Thi…

Published: April 26, 2023. Version: 1.0.0 | DOI: 10.13026/grp0-z205


Software Open Federated

PhysioTag: An Open-Source Platform for Collaborative Annotation of Physiological Waveforms

Source: Physionet

To develop robust algorithms for automated diagnosis of medical conditions such as cardiac arrhythmias, researchers require large collections of data with human expert annotations. Currently, there is a lack of accessible, open-source platforms for …

annotation

Published: April 25, 2023. Version: 1.0.0 | DOI: 10.13026/g06j-3612


Database Open Federated

PTB-XL+, a comprehensive electrocardiographic feature dataset

Source: Physionet

The PTB-XL+ dataset is a comprehensive feature dataset that supplements the PTB-XL ECG dataset. It includes ECG features extracted via two commercial and one open-source algorithm in a harmonized format as well as median beats or, where applicable, …

electrocardiography ecg ptb-xl ptb

Published: April 25, 2023. Version: 1.0.0 | DOI: 10.13026/m5qc-8m53


Challenge Contributor Review Federated

BioNLP Workshop 2023 Shared Task 1A: Problem List Summarization

Source: Physionet

Automatically summarizing patients’ main problems from the daily care notes in the electronic health record can help mitigate information and cognitive overload for clinicians and provide augmented intelligence via computerized diagnostic deci…

electronic health record summarization bionlp clinical natural language processing

Published: April 13, 2023. Version: 1.1.0 | DOI: 10.13026/1crd-qk14


Database Open Federated

SCG-RHC: Wearable Seismocardiogram Signal and Right Heart Catheter Database

Source: Physionet

We are providing an open access dataset of 73 patients to study better ways to monitor changes in pulmonary arterial pressure (PAP) and pulmonary capillary wedge pressure (PCWP) using a small, non-invasive, chest-worn wearable patch. The ground trut…

Published: March 31, 2023. Version: 1.0.0 | DOI: 10.13026/133d-pk11


Database Open Federated

CogWear: Can we detect cognitive effort with consumer-grade wearables?

Source: Physionet

The CogWear database consists of two datasets: pilot and survey gamification experiment. The pilot dataset includes physiological signals from 11 volunteers captured by three wearable devices (Empatica E4 watch, Samsung Galaxy Watch4 and Muse S…

Published: March 31, 2023. Version: 1.0.0 | DOI: 10.13026/5f6t-b637


Database Restricted Federated

MIMIC-Eye: Integrating MIMIC Datasets with REFLACX and Eye Gaze for Multimodal Deep Learning Applications

Source: Physionet

Deep learning technologies have been widely adopted in medical imaging due to their ability to extract features from images and make accurate diagnoses automatically. Medical imaging technologies are particularly useful because they can be trained t…

Published: March 23, 2023. Version: 1.0.0 | DOI: 10.13026/pc72-as03


Database Credentialed Federated

MS-CXR-T: Learning to Exploit Temporal Structure for Biomedical Vision-Language Processing

Source: Physionet

MS-CXR-T is a multi-modal benchmark dataset for evaluating biomedical vision-language processing (VLP) models on two distinct temporal tasks in radiology: image classification and sentence similarity. The former comprises multi-image frontal chest X…

multimodal cxr vision-language processing radiology chest x-ray disease progression

Published: March 18, 2023. Version: 1.0.0 | DOI: 10.13026/pg10-j984


Database Credentialed Federated

GLOBEM Dataset: Multi-Year Datasets for Longitudinal Human Behavior Modeling Generalization

Source: Physionet

We present the first multi-year mobile sensing datasets. Our multi-year data collection studies span four years (10 weeks each year, from 2018 to 2021). The four datasets contain data collected from 705 person-years (497 unique participants) with di…

human behavior modeling ubiquitous computing well-being health passive mobile sensing

Published: March 14, 2023. Version: 1.1 | DOI: 10.13026/r9s1-s711


Database Credentialed Federated

SCRIPT CarpeDiem Dataset: demographics, outcomes, and per-day clinical parameters for critically ill patients with suspected pneumonia

Source: Physionet

Traditional approaches to analyzing episodes of patient care in the ICU examine features on presentation and outcomes on discharge, collapsing the numerous events that happen during a patient’s stay and ignoring intercurrent ICU complications …

Published: March 13, 2023. Version: 1.1.0 | DOI: 10.13026/5phr-4r89