Resources
Database Credentialed Federated
Embedding-Based Representations for BRSET and mBRSET
BRSET and mBRSET are publicly available Brazilian ophthalmological datasets composed of curated retinal fundus photographs with associated clinical and demographic information. While these resources enable diverse research applications, training dee…
computer vision ophthalmology vector embeddings
Published: March 30, 2026. Version: 1.0.0 | DOI: 10.13026/1h4p-vz70
Database Credentialed Federated
SCRIPT CarpeDiem Dataset: demographics, outcomes, and per-day clinical parameters for critically ill patients with suspected pneumonia
Traditional approaches to analyzing episodes of patient care in the ICU examine features on presentation and outcomes on discharge, collapsing the numerous events that happen during a patient’s stay and ignoring intercurrent ICU complications …
Published: March 26, 2026. Version: 1.9.0 | DOI: 10.13026/etpr-0n55
Database Credentialed Federated
MIMIC-CXR-Ext-ILS: Lesion Segmentation Masks and Instruction-Answer Pairs for Chest X-rays
The applicability of current lesion segmentation models for chest X-rays (CXRs) has been limited both by a small number of target labels and the reliance on complex, expert-level text inputs, creating a barrier to practical use. To address these lim…
text-guided segmentation lesion segmentation chest x-ray segmentation
Published: March 25, 2026. Version: 1.0.0 | DOI: 10.13026/8ejy-4t06
Software Open Federated
Digital Data Real-Time Ingestion Utility
We present a Python-based utility for real-time ingestion of digital physiological signals and study enrollment metadata into an Oracle database. The application combines filesystem event monitoring, a GUI data entry form, and thin-mode Oracle conne…
empty database reliability bedside digital signal collection quality control schema-only database real-time recording
Published: March 25, 2026. Version: 1.0.0 | DOI: 10.13026/jt51-cs74
Database Credentialed Federated
MIMIC-IV-Ext-PE: Pulmonary Embolism Labels for CT Pulmonary Angiography Radiology Reports
Pulmonary embolism (PE) is a leading cause of preventable in-hospital mortality. Advances in diagnosis, risk stratification, and prevention can improve outcomes. Large, publicly available datasets are needed to move research forward but are lacking …
Published: March 24, 2026. Version: 1.0.0 | DOI: 10.13026/5qq1-zv65
Database Credentialed Federated
Clinical Time Series Datasets for Trajectory Flow Matching Evaluation: ICU Sepsis, ICU Cardiac Arrest, and ICU GIB Cohorts
This resource comprises three clinical time series datasets used in the paper Trajectory Flow Matching with Applications to Clinical Time Series Modeling to evaluate models for handling irregularly sampled data in critical care settings. The ICU Sep…
clinical time series
Published: March 24, 2026. Version: 1.0.0 | DOI: 10.13026/pqe3-bv16
Database Credentialed Federated
MIMIC-IV-Ext-CLIF: MIMIC-IV in the Common Longitudinal ICU data Format (CLIF)
MIMIC-IV-Ext-CLIF is a derived dataset of MIMIC-IV v3.1, transformed into the Common Longitudinal ICU data Format (CLIF). CLIF is an open-source critical care data model developed by a consortium of more than 10 US academic medical centers to standa…
mimic clif the common longitudinal icu data format critical care
Published: March 24, 2026. Version: 1.1.0 | DOI: 10.13026/j481-g420
Database Credentialed Federated
MIMIC-IV-Ext-MedicalBench: Evaluating Large Language Models Towards Improved Medical Concept Extraction
Medical concept extraction from electronic health records underpins many downstream applications, yet remains challenging because medically meaningful concepts, such as diagnosis, are frequently implied rather than explicitly stated in medical narra…
Published: March 24, 2026. Version: 1.0.0 | DOI: 10.13026/j98m-g356
Database Open Federated
Hillel Yaffe Glaucoma Dataset (HYGD): A Gold-Standard Annotated Fundus Dataset for Glaucoma Detection
Glaucomatous optic neuropathy (GON) is a leading cause of irreversible blindness worldwide, affecting an estimated 64.3 million people globally with projections reaching 111.8 million by 2040. Approximately 50% of cases remain undiagnosed until adva…
ophthalmology glaucoma dfi gon fundus gold-standard retina
Published: March 17, 2026. Version: 1.1.0 | DOI: 10.13026/m92s-0z95
Database Credentialed Federated
Structured Viewing Classification Annotations From the MIMIC-IV-ECHO Dataset (ECHOVIEW)
The development of robust echocardiography analyses has been limited by the scarcity of well-annotated, labeled echocardiogram datasets. We introduce the Structured Viewing Classification Annotations From the MIMIC-IV-ECHO Dataset (ECHOVIEW), a deri…
Published: March 17, 2026. Version: 0.1 | DOI: 10.13026/ywz0-5b62