Resources


Database Open Federated

Electroencephalogram and eye-gaze datasets for robot-assisted surgery performance evaluation

Source: Physionet

Surgical training and patient safety depend on objective and accurate performance evaluation. Robot-assisted surgery (RAS) is newer and its training less well defined, but resources are not easily accessed to support data collection from participant…

Published: July 14, 2023. Version: 1.0.0 | DOI: 10.13026/qj5m-n649


Database Credentialed Federated

CHIFIR: Cytology and Histopathology Invasive Fungal Infection Reports

Source: Physionet

Surveillance of invasive fungal infection (IFI) in clinical settings is a laborious process requiring a detailed review of patient medical history. One of the key sources of clinical information is cytology and histopathology reports: pathologist-pr…

invasive fungal infections nlp information extraction clinical documentation

Published: July 12, 2023. Version: 1.0.0 | DOI: 10.13026/fmj9-p237


Database Credentialed Federated

Annotated MIMIC-IV discharge summaries for a study on deidentification of names

Source: Physionet

We introduce a dataset of people’s names and clinical note templates to support research on the demographic bias of de-identification systems. The dataset contains 16 name sets that vary along four demographic dimensions: gender, race, name po…

fairness deidentification

Published: July 5, 2023. Version: 1.0 | DOI: 10.13026/63ab-qf77


Database Open Federated

CheXmask Database: a large-scale dataset of anatomical segmentation masks for chest x-ray images

Source: Physionet

The CheXmask Database presents a comprehensive, uniformly annotated collection of chest radiographs, constructed from six public databases: CANDID-PTX, ChestX-ray8, Chexpert, MIMIC-CXR-JPG, Padchest and VinDr-CXR. The database aggregates 676,803 ana…

medical image segmentation automatic quality assesment chest x-ray segmentation

Published: June 27, 2023. Version: 0.1 | DOI: 10.13026/dx54-8351


Database Open Federated

PTB-XL+, a comprehensive electrocardiographic feature dataset

Source: Physionet

The PTB-XL+ dataset is a comprehensive feature dataset that supplements the PTB-XL ECG dataset. It includes ECG features extracted via two commercial and one open-source algorithm in a harmonized format as well as median beats or, where applicable, …

ecg electrocardiography ptb-xl ptb

Published: June 27, 2023. Version: 1.0.1 | DOI: 10.13026/g6h6-7g88


Database Credentialed Federated

Radiology Report Expert Evaluation (ReXVal) Dataset

Source: Physionet

The Radiology Report Expert Evaluation (ReXVal) Dataset is a publicly available dataset of radiologist evaluations of errors in automatically generated radiology reports. The dataset contains annotations from 6 board certified radiologists on clinic…

Published: June 20, 2023. Version: 1.0.0 | DOI: 10.13026/2fp8-qr71


Database Open Federated

I-CARE: International Cardiac Arrest REsearch consortium Database

Source: Physionet

The International Cardiac Arrest REsearch consortium (I-CARE) Database includes baseline clinical information and continuous electroencephalogram (EEG) and electrocardiogram (ECG) recordings from comatose patients following cardiac arrest. The …

Published: June 16, 2023. Version: 2.0 | DOI: 10.13026/avek-0p97


Database Credentialed Federated

MIMICEL: MIMIC-IV Event Log for Emergency Department

Source: Physionet

In this work, we extract an event log from the MIMIC-IV-ED dataset by adopting a well-established event log generation methodology, and we name this event log MIMICEL. The data tables in the MIMIC-IV-ED dataset relate to each other based on the exis…

Published: June 16, 2023. Version: 2.1.0 | DOI: 10.13026/c9yj-1t90


Database Contributor Review Federated

Salzburg Intensive Care database (SICdb), a freely accessible intensive care database

Source: Physionet

The SICdb dataset offers insights into over 27 thousand intensive care admissions, including therapies and data on preceding surgeries. Data were collected between 2013 and 2021 from four different intensive care units at the University Hospital Sal…

intensive care critical care clinical machine learning open data

Published: June 12, 2023. Version: 1.0.6 | DOI: 10.13026/dm9f-dm56


Database Open Federated

KINECAL

Source: Physionet

The field of human action recognition has made great strides in recent years, much helped by the availability of a wide variety of datasets that use Kinect to record human movement. Conversely, progress towards using Kinect in clinical practice has …

balance posturography clinical tests postural sway falls-risk age-related changes

Published: June 8, 2023. Version: 1.0.3 | DOI: 10.13026/vvkp-ct80