Resources


Database Open Federated

A Comprehensive Dataset of Pattern Electroretinograms for Ocular Electrophysiology Research: The PERG-IOBA Dataset

Source: Physionet

The pattern electroretinogram (PERG) is a valuable tool in ophthalmic electrophysiology, offering a non-invasive and objective method to evaluate central retinal function. By measuring electrical activity in the macula and retinal ganglion cells, PE…

Published: Jan. 19, 2024. Version: 1.0.0 | DOI: 10.13026/d24m-w054


Database Credentialed Federated

ODD: A Benchmark Dataset for the NLP-based Opioid Related Aberrant Behavior Detection

Source: Physionet

Opioid related aberrant behaviors (ORAB) present novel risk factors for opioid overdose. Previously, ORAB have been mainly assessed by survey results and by monitoring drug administrations. Such methods however, cannot scale up and do not cover the …

natural language processing substance use opioid related aberrant behavior

Published: Jan. 11, 2024. Version: 1.0.0 | DOI: 10.13026/qrje-z188


Database Credentialed Federated

EHR-DS-QA: A Synthetic QA Dataset Derived from Medical Discharge Summaries for Enhanced Medical Information Retrieval Systems

Source: Physionet

This dataset was designed and created to enable advancements in healthcare-focused large language models, particularly in the context of retrieval-augmented clinical question-answering capabilities. Developed using a self-constructed pipeline based …

mimic-iv large language models clinical question-answering medical discharge summaries

Published: Jan. 11, 2024. Version: 1.0.0 | DOI: 10.13026/25fx-f706


Database Open Federated

Surface electromyographic signals collected during long-lasting ground walking of young able-bodied subjects

Source: Physionet

The present dataset is composed of long-lasting (around 5 minutes) surface electromyographic (sEMG) signals recorded from 2011 and 2018 during ground walking of 31 young (20 years < age < 30 years) able-bodied subjects in the Movement Analysis…

biomedical signals muscle recruitment surface emg signal walking gait analysis

Published: Jan. 9, 2024. Version: 1.0.1 | DOI: 10.13026/grdj-qx06


Model Credentialed Federated

Asclepius-R : Clinical Large Language Model Built On MIMIC-III Discharge Summaries

Source: Physionet

The development of large language models tailored for handling patients’ clinical notes is often hindered by the limited accessibility and usability of these notes due to strict privacy regulations. To address these challenges, we first create…

clinical notes large language model synthetic clinical notes open-source clinical llm asclepius synthetic notes llm

Published: Jan. 9, 2024. Version: 1.0.0 | DOI: 10.13026/gwjr-7j25


Database Credentialed Federated

Neurocritical care waveform recordings in pediatric patients

Source: Physionet

This database contains de-identified, time-locked waveform recordings from pediatric patients in neurocritical care. Typical waveforms collected at the bedside include arterial blood pressure, intracranial pressure, and cerebral blood flow velocity.…

arterial blood pressure noninvasive icp neurocritical care neurotrauma cerebral blood flow velocity pediatric patients intracranial pressure

Published: Jan. 9, 2024. Version: 1.0.0 | DOI: 10.13026/5kvn-pp29


Database Open Federated

CheXmask Database: a large-scale dataset of anatomical segmentation masks for chest x-ray images

Source: Physionet

The CheXmask Database presents a comprehensive, uniformly annotated collection of chest radiographs, constructed from six public databases: CANDID-PTX, ChestX-ray8, Chexpert, MIMIC-CXR-JPG, Padchest and VinDr-CXR. The database aggregates 676,803 ana…

chest x-ray segmentation medical image segmentation automatic quality assesment

Published: Jan. 9, 2024. Version: 0.3 | DOI: 10.13026/nv4g-fr21


Database Open Federated

Patient-level dataset to study the effect of COVID-19 in people with Multiple Sclerosis

Source: Physionet

Multiple Sclerosis (MS) is an inflammatory autoimmune disease of the central nervous system, causing increased vulnerability to infections and disability among young adults. Ever since the coronavirus disease 2019 (COVID-19) outbreak, caused by seve…

Published: Jan. 2, 2024. Version: 1.0.1 | DOI: 10.13026/77ta-1866


Database Credentialed Federated

INSPIRE, a publicly available research dataset for perioperative medicine

Source: Physionet

We present the INSPIRE dataset, a publicly available research dataset in perioperative medicine, which includes approximately 130,000 cases (50% of all surgical cases) who underwent anesthesia for surgery at an academic institution in South Korea be…

multi-center surgery perioperative medicine open dataset

Published: Dec. 28, 2023. Version: 1.2 | DOI: 10.13026/4evs-wq50


Database Open Federated

Open Access Dataset and Toolbox of High-Density Surface Electromyogram Recordings

Source: Physionet

We provide an open access dataset of High densitY Surface Electromyogram (HD-sEMG) Recordings (named "Hyser"). We acquired data from 20 subjects with each subject participating in our experiment twice on separate days following the same ex…

Published: Dec. 28, 2023. Version: 2.0.0 | DOI: 10.13026/hxan-pe94