Resources
Database Credentialed Federated
EHRNoteQA: A Patient-Specific Question Answering Benchmark for Evaluating Large Language Models in Clinical Settings
We introduce EHRNoteQA, a patient-specific question answering benchmark tailored for evaluating Large Language Models (LLMs) in clinical environments. Based on MIMIC-IV Electronic Health Record (EHR), a team of three medical professionals has curate…
Published: April 3, 2024. Version: 1.0.0 | DOI: 10.13026/kvca-f224
Database Credentialed Federated
RaDialog Instruct Dataset
Conversational AI tools that can generate and discuss clinically correct radiology reports for a given medical image have the potential to transform radiology. Such a human-in-the-loop radiology assistant could facilitate a collaborative diagnostic …
radiology report generation large vision-language models medical image understaning radiology assistant radiology chatbot
Published: March 26, 2024. Version: 1.0.0 | DOI: 10.13026/zecj-bh52
Database Open Federated
PADS - Parkinsons Disease Smartwatch dataset
Parkinson’s disease (PD) is the second-most common neurodegenerative disorder, while incidence and worldwide burden are further increasing. In the era of digital health transformation, smart devices and mobile sensors, including smartphones an…
movement disorders wearables parkinsons disease
Published: March 26, 2024. Version: 1.0.0 | DOI: 10.13026/m0w9-zx22
Database Open Federated
ScientISST MOVE: Annotated Wearable Multimodal Biosignals recorded during Everyday Life Activities in Naturalistic Environments
Existing datasets containing physiological data are mostly acquired at rest or in controlled scenarios. As a result, algorithms developed using such data may not perform as well as with biosignals acquired in dynamic and uncontrolled environments. S…
greet wearable multimodal lift uncontrolled environments run jump gesticulate walk
Published: March 26, 2024. Version: 1.0.1 | DOI: 10.13026/hyxq-r919
Model Credentialed Federated
Asclepius-R : Clinical Large Language Model Built On MIMIC-III Discharge Summaries
The development of large language models tailored for handling patients’ clinical notes is often hindered by the limited accessibility and usability of these notes due to strict privacy regulations. To address these challenges, we first create…
large language model synthetic clinical notes synthetic notes asclepius open-source llm clinical llm clinical notes
Published: March 26, 2024. Version: 1.1.0 | DOI: 10.13026/ckbf-pt70
Database Open Federated
Respiratory and heart rate monitoring dataset from aeration study
A study was conducted to collect respiratory pressure and flow data for model-based assessment, alongside electrical impedance tomography (EIT) aeration, electrocardiogram (ECG), and heart-rate belt (HRB) data. A 20 subjects set was selected with no…
Published: March 20, 2024. Version: 1.0.0 | DOI: 10.13026/e4dt-f689
Database Restricted Federated
CheXchoNet: A Chest Radiograph Dataset with Gold Standard Echocardiography Labels
Existing chest radiograph datasets, such as CheXpert and ChestX-ray14, have driven the development of new machine learning approaches to achieve expert or near-expert level performance on a variety of tasks. The primary focus of models developed usi…
early detection heart failure cardiac structural abnormalties deep learning chest x-rays
Published: March 20, 2024. Version: 1.0.0 | DOI: 10.13026/kp08-ws25
Database Credentialed Federated
MIMIC-CXR-JPG - chest radiographs with structured labels
The MIMIC Chest X-ray JPG (MIMIC-CXR-JPG) Database v2.0.0 is a large publicly available dataset of chest radiographs in JPG format with structured labels derived from free-text radiology reports. The MIMIC-CXR-JPG dataset is wholly derived from MIMI…
computer vision chest x-ray mimic deep learning radiology
Published: March 12, 2024. Version: 2.1.0 | DOI: 10.13026/jsn5-t979
Challenge Credentialed Federated
Discharge Me: BioNLP ACL'24 Shared Task on Streamlining Discharge Documentation
"Discharge Me!", part of the BioNLP workshop co-located with ACL 2024, seeks to alleviate the significant burden on clinicians who dedicate substantial time to crafting detailed discharge notes in the EHR. Participants in the task will exp…
generation discharge summary bionlp acl
Published: March 5, 2024. Version: 1.2 | DOI: 10.13026/4a0k-4360
Database Open Federated
CheXmask Database: a large-scale dataset of anatomical segmentation masks for chest x-ray images
The CheXmask Database presents a comprehensive, uniformly annotated collection of chest radiographs, constructed from five public databases: ChestX-ray8, Chexpert, MIMIC-CXR-JPG, Padchest and VinDr-CXR. The database aggregates 657,566 anatomical seg…
chest x-ray segmentation medical image segmentation automatic quality assesment
Published: March 1, 2024. Version: 0.4 | DOI: 10.13026/pgag-by42