Resources
Database Credentialed Federated
MIMIC-IV-ECG-Ext-ICD: Diagnostic labels for MIMIC-IV-ECG
The number of publicly available ECG datasets has increased tremendously in the past few years and several of these datasets have developed into widely used benchmarking datasets. However, most of them exhibit a common limitation, namely the relianc…
electrocardiography machine learning mimic
Published: July 30, 2024. Version: 1.0.0 | DOI: 10.13026/hdyc-1h77
Database Restricted Federated
OpenOximetry Repository
The OpenOximetry Repository is a structured database designed to store clinical and laboratory pulse oximetry data and allows for consolidation of data sets held by collaborating organizations. Matched or independent readings of oxygen saturations, …
Published: July 30, 2024. Version: 1.0.1 | DOI: 10.13026/2g7z-t345
Database Credentialed Federated
MIMIC-CXR Database
The MIMIC Chest X-ray (MIMIC-CXR) Database v2.0.0 is a large publicly available dataset of chest radiographs in DICOM format with free-text radiology reports. The dataset contains 377,110 images corresponding to 227,835 radiographic studies per…
machine learning mimic computer vision chest x-rays radiology natural language processing
Published: July 23, 2024. Version: 2.1.0 | DOI: 10.13026/4jqj-jw95
Database Credentialed Federated
MIMIC-IV
Retrospectively collected medical data has the opportunity to improve patient care through knowledge discovery and algorithm development. Broad reuse of medical data is desirable for the greatest public good, but data sharing must be done in a manne…
mimic critical care intensive care unit machine learning
Published: July 23, 2024. Version: 3.0 | DOI: 10.13026/hxp0-hg59
Database Credentialed Federated
EHRXQA: A Multi-Modal Question Answering Dataset for Electronic Health Records with Chest X-ray Images
Electronic Health Records (EHRs), which contain patients' medical histories in various multi-modal formats, often overlook the potential for joint reasoning across imaging and table modalities underexplored in current EHR Question Answering (QA)…
machine learning evaluation visual question answering question answering electronic health records benchmark multi-modal question answering deep learning chest x-ray ehr question answering semantic parsing
Published: July 23, 2024. Version: 1.0.0 | DOI: 10.13026/bp5y-qt70
Database Credentialed Federated
MIMIC-Ext-MIMIC-CXR-VQA: A Complex, Diverse, And Large-Scale Visual Question Answering Dataset for Chest X-ray Images
We introduce MIMIC-Ext-MIMIC-CXR-VQA (i.e., Extended from MIMIC database), a complex, diverse, and large-scale dataset designed for Visual Question Answering (VQA) tasks within the medical domain, focusing primarily on chest radiographs. This datase…
multimodal question answering radiology machine learning deep learning electronic health records evaluation benchmark chest x-ray visual question answering
Published: July 19, 2024. Version: 1.0.0 | DOI: 10.13026/deqx-d943
Database Credentialed Federated
RaDialog Instruct Dataset
Conversational AI tools that can generate and discuss clinically correct radiology reports for a given medical image have the potential to transform radiology. Such a human-in-the-loop radiology assistant could facilitate a collaborative diagnostic …
medical image understaning radiology chatbot radiology report generation radiology assistant large vision-language models
Published: July 12, 2024. Version: 1.1.0 | DOI: 10.13026/40d2-wj86
Database Credentialed Federated
MIMIC-IV-Ext Clinical Decision Making: A MIMIC-IV Derived Dataset for Evaluation of Large Language Models on the Task of Clinical Decision Making for Abdominal Pathologies
Clinical decision making is one of the most impactful parts of a physician's responsibilities and stands to benefit greatly from AI solutions such as large language models (LLMs). However, while many datasets exist to test the performance of AI …
clinical decision making abdominal pathologies large language models treatment plan emergency room diagnosis
Published: July 8, 2024. Version: 1.1 | DOI: 10.13026/ztyg-ah64
Database Restricted Federated
Organ Retrieval and Collection of Health Information for Donation (ORCHID)
There are well-documented inefficiencies and inequities in the current system of deceased donor organ transplantation. While much prior research has focused on designing better allocation systems to distribute donated organs, more can be done to stu…
organ procurement organizations organ transplantation
Published: June 27, 2024. Version: 2.0.0 | DOI: 10.13026/w10c-6g08
Database Credentialed Federated
mBRSET, a Mobile Brazilian Retinal Dataset
The Mobile Brazilian Retinal Dataset (mBRSET) presents a pioneering collection of retinal images captured via portable cameras, encompassing a diverse range of ethnic backgrounds from Itabuna, Bahia, Brazil. Comprising 5164 images from 1291 patients…
retina ophthalmology
Published: June 26, 2024. Version: 1.0 | DOI: 10.13026/qxpd-1y65