Resources


Database Credentialed Federated

CovIdentify Dataset

Source: Physionet

This dataset supports the study "A method for intelligent allocation of diagnostic testing by leveraging data from commercial wearable devices: a case study on COVID-19," which developed an Intelligent Testing Allocation (ITA) method. The …

Published: Nov. 25, 2024. Version: 1.0.0 | DOI: 10.13026/ncq1-vp79


Database Credentialed Federated

Northwestern ICU (NWICU) database

Source: Physionet

Retrospective medical data collection is essential for advancing patient care, offering insights and supporting the development of health technology. The Medical Information Mart for Intensive Care (MIMIC)-III database has been instrumental in provi…

Published: Nov. 19, 2024. Version: 0.1.0 | DOI: 10.13026/s84w-1829


Database Credentialed Federated

MS-CXR: Making the Most of Text Semantics to Improve Biomedical Vision-Language Processing

Source: Physionet

We release a new dataset, MS-CXR, with locally-aligned phrase grounding annotations by board-certified radiologists to facilitate the study of complex semantic modelling in biomedical vision–language processing. The MS-CXR dataset provides 116…

localization phrase grounding vision-language processing chest x-ray

Published: Nov. 15, 2024. Version: 1.1.0 | DOI: 10.13026/9g2z-jg61


Database Credentialed Federated

MIMIC-IV on FHIR

Source: Physionet

Fast Healthcare Interoperability Resources (FHIR) has emerged as a robust standard for healthcare data exchange. To explore the use of FHIR for the process of data harmonization, we converted the Medical Information Mart for Intensive Care…

us core mimic-iv electronic health record mimic fast healthcare interoperability resources fhir

Published: Nov. 12, 2024. Version: 2.1 | DOI: 10.13026/rrj1-ny66


Database Contributor Review Federated

Chest Computed Tomography for patients with sepsis in the Emergency Department

Source: Physionet

Sepsis is a systematic inflammatory response syndrome that can impact all vital organs. Lung is the most commonly involved organ that sepsis can cause lung injury. Lung injury can have a variety clinical presentations and can be captured by chest im…

sepsis

Published: Oct. 28, 2024. Version: 1.0.0 | DOI: 10.13026/zne5-qh18


Database Contributor Review Federated

COVID Data for Shared Learning (CDSL): A comprehensive, multimodal COVID-19 dataset from HM Hospitales

Source: Physionet

COVID Data for Shared Learning (CDSL) is a multimodal database comprising de-identified medical data from 4,479 patients who were hospitalized with confirmed or suspected COVID-19 in the Spanish 'HM Hospitales' group from 2019-12-26 to 2021-…

multimodal database covid-19 radiological images open data healthcare data machine learning and ai

Published: Oct. 25, 2024. Version: 1.0.0 | DOI: 10.13026/1176-6c44


Model Credentialed Federated

Shareable Artificial Intelligence to Extract Cancer Outcomes from Electronic Health Records for Precision Oncology Research

Source: Physionet

Databases that link molecular data to clinical outcomes can inform precision cancer research into novel prognostic and predictive biomarkers. However, outside of clinical trials, cancer outcomes are typically recorded only in text form within electr…

Published: Oct. 24, 2024. Version: 1.0.0 | DOI: 10.13026/h2nj-p344


Database Credentialed Federated

C-REACT: Contextualized Race and Ethnicity Annotations for Clinical Text

Source: Physionet

The Contextualized Race and Ethnicity Annotations for Clinical Text (C-REACT) dataset is a large publicly available corpus of sentences from clinical notes manually annotated for information related to race and ethnicity (RE). The corpus presented h…

patient country information race and ethnicity patient language information clinical notes

Published: Oct. 21, 2024. Version: 1.0.0 | DOI: 10.13026/z8tq-v658


Database Credentialed Federated

MedDec: Medical Decisions for Discharge Summaries in the MIMIC-III Database

Source: Physionet

Medical decisions directly impact individuals’ health and well-being. Extracting decision spans from clinical notes plays a crucial role in understanding medical decision-making processes. The MedDec dataset includes expert-annotated decisions…

medical decisions natural language processing span classification discharge summary mimic

Published: Oct. 16, 2024. Version: 1.0.0 | DOI: 10.13026/nqnw-7d62


Database Contributor Review Federated

A multimodal dental dataset facilitating machine learning research and clinic services

Source: Physionet

Oral diseases affect nearly 3.5 billion people, with the majority residing in low- and middle-income countries. Due to limited healthcare resources, many individuals are unable to access proper oral healthcare services. Image-based machine learning …

Published: Oct. 11, 2024. Version: 1.1.0 | DOI: 10.13026/h1tt-fc69